rs6363586 SNP Detail

Summary

• ID
  rs6363586
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146015957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGTGTTGCT CCTTAGGATG
  CTAGGCCTGG CTTACCATTG TCTGCTTAAC TGATTTCCTT ATGTTTAGCA TCCGGACCAC
  AGATTTCCAC TTGTTACCAA GTGTGCCATC TGGTTAGGAC TTCCTCCCTT GAATGTGGAC
  AGATCTGTAA CTATTTTATA TATAACAGTG TGAGAACAGC CGCATGCCCT TTCTGGATTA
  Y
  GCGTGCACGA TGATAATATT AATTTTGCTA GGAGACACGC TCTTTGCTGA CTGTGATAAA
  GACGCAGGCT GCTGTGCTGA GACCATGGGT GGAAACGAAG CAGACTGGAT GTTAATTAAT
  CGTTCTCCCT CAACAGCCTG CGGAGGACTC TCCAGCGCTG TGAAAACTAG CCAACCATGG
  GGAAGCTTGA TTCAAGTTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8769684	WI_WGS_3_146843450	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6363586					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146015957 () rs orientation: forward

Symbol	Name	Function Class
D3Mit292	DNA segment, Chr 3, Massachusetts Institute of Technology 292	1594 bp proximal
Rr586996	regulatory region 586996	726 bp proximal