GAGCA TGTGATAAGC CTGTGACTTC Y CTTTAAGGAG CTTCTCATGA TGGCT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C57BL/6J |
CZECHII/EiJ |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss8769981 | WI_WGS_3_81600386 | WI | MOUSE | f | SNP | C | T | ||
ss320812972 | CHEV_3_80716101 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | C57BL/6J |
CZECHII/EiJ |
LG/J |
SM/J |
||||
rs6363881 | SNP | C | T | T | C |
Location: Chr3:80819486 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi13282 | CpG island 13282 | 891 bp proximal | ||||||
Glrb | glycine receptor, beta subunit | within coordinates | ||||||
Gm54207 | predicted gene, 54207 | 359 bp upstream | ||||||
Gm65109 | predicted gene, 65109 | 1042 bp upstream | ||||||
Rr578673 | regulatory region 578673 | 628 bp proximal | ||||||
Rr578674 | regulatory region 578674 | 1053 bp proximal | ||||||
Rr578675 | regulatory region 578675 | 1339 bp proximal | ||||||
Tssr33773 | transcription start site region 33773 | 1363 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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