rs6364051 SNP Detail

Summary

• ID
  rs6364051
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183850190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         AACTTGGAAG
  AAAGCATGGC TNTAGCAAGT CTGGCAGGAG GCTGTCACTT TCCAGCTTCT AGAGCAAGCC
  TCCCTCATCT CCTCANGGAA CTGGAAGCAT GGCAGCCGTC TCTGGCCAAA GGCCGGCTGT
  CTTGAATTCC AGGGAGCAGC TTGCTGTGAT TAGGCATCAT TGCACGGAGA GCTGTGCAGA
  TCGCAGTGTG TCGCTTTGGA GTTCACAATA AAATGCCCTG GAAGCTTACG GAGGCATNTT
  W
  TGTACATATA ATGATTTAGT GGGCATGCCT CTCTGTATTT TAAATTTCAT CAGTGGCCCT
  CCTTGTCTAT AAAGGAAGCT GATGAGAAAC TCCTTCAGCC CTTCTGAGCT GCAGTGCATT
  CGCTCATGAG CTGGCTCTTC AGTTTGCCAG ATGCACACAG CTGGCCAGAA AGTCTTGTTG
  TGGGTATGCT GTGGTTTCTA CACGGATGTG GTATACTGTC AATAACAGGT AACTTCTCCC
  CTCCAAGAGT                                                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8770153	WI_WGS_1_185216081	WI	MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6364051					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183850190 () rs orientation: forward

Symbol	Name	Function Class
Gm69596	predicted gene, 69596	281 bp upstream
Rr425179	regulatory region 425179	30 bp proximal
Rr425180	regulatory region 425180	292 bp proximal
Tssr10581	transcription start site region 10581	279 bp upstream