rs6364677 SNP Detail

Summary

• ID
  rs6364677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:112454455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATCTGGAG ATACAGTCAT
  CACAGATGAA GGTGCAGAAC ATCTCTGGAG GAGAGAGAGG GAGGAGCATA ATGCTTTTCC
  CAAAGATGGA TGAACTGAGG TACTAAGAAG ACAGGTCATG CGTCCATGGA TGTAGTTCAG
  TTGGTAGAGG GCTTACCTAG AAAGCACATG CCTTCAATGC CCAACAATTG CATAGAATCA
  R
  GCATAGCAGC CCACATCTGC AAATGCAAGG GGTGGATGTA AGAGAATCAG CAATCCAAGA
  TCAGCCTCGG CTATATAGAA TACTCAAGGC TAACCTGGGC TACACGAGAA CTTGACTCTA
  AACAGGAAAC AAGCAAAAGA GAAGACTGTA GCATGCTTTG GGTCTTGAAG AATAGATTGA
  AGCCAAGACA CTGGCCTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8770781	WI_WGS_13_109909132	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6364677					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:112454455 () rs orientation: forward

Symbol	Name	Function Class
Ankrd55	ankyrin repeat domain 55	within coordinates
Tssr121103	transcription start site region 121103	468 bp upstream
Tssr121104	transcription start site region 121104	495 bp upstream
Tssr121105	transcription start site region 121105	526 bp upstream