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rs6364745 SNP Detail
Summary
  • ID
    rs6364745
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr3:101126963 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CTGGAGACCC GAGTAACATT
    TACTTGAGAA CAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AGCAAAAAGA GTGCTTTCAA
    AGTCAAGCCC CCAAGCGCTT CACGGCTAAT CATGTGCCAA GTCACGTGGC TAGGACAATG
    ACAGGCAGGG TCGCTGTCCA CAAGACCTTT CAATTAGGTA GACTTCTCTC ATGTTTACAC
    Y
    CTTAATGGAG CTATGAATTA TCTTTGTTTA CTAGGATTAA GACATGATCT CATCTCAGTG
    ATTTAGAATA GCAATTGTCA ATATGGGTCT ACTCCCACTG ATGTCTTAGT ATAAAACCCT
    AAGATAACCA AATTCAGGCC AAGGGCTGTA AGTGAAGCAA GATGCCCAGC ATGTGTGGAA
    ATACTTTATT ATTTCCACCC                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
C57BL/6J
CZECHII/EiJ
ss8770849 WI_WGS_3_101330904 WI MOUSE f SNP C T
SNP Consensus Information
SNP Consensus Type
C57BL/6J
CZECHII/EiJ
rs6364745 SNP C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:101126963 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm65590 predicted gene, 65590 within coordinates
Rr581978 regulatory region 581978 430 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory