rs6365268 SNP Detail

Summary

• ID
  rs6365268
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:112454561 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGACAGGT CATGCGTCCA
  TGGATGTAGT TCAGTTGGTA GAGGGCTTAC CTAGAAAGCA CATGCCTTCA ATGCCCAACA
  ATTGCATAGA ATCAGGCATA GCAGCCCACA TCTGCAAATG CAAGGGGTGG ATGTAAGAGA
  ATCAGCAATC CAAGATCAGC CTCGGCTATA TAGAATACTC AAGGCTAACC TGGGCTACAC
  R
  AGAACTTGAC TCTAAACAGG AAACAAGCAA AAGAGAAGAC TGTAGCATGC TTTGGGTCTT
  GAAGAATAGA TTGAAGCCAA GACACTGGCC TTCTTCCCTT GCTGGTCTCT CTAATTTTGG
  GAAACCAGCA TGCCCAAAGA GTCATGACAT GCAAAGAGTG CCTAATCCCA AGGCTCCTTG
  CCAACACGTG GTGGCGTTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8771377	WI_WGS_13_109909238	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6365268					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:112454561 () rs orientation: forward

Symbol	Name	Function Class
Ankrd55	ankyrin repeat domain 55	within coordinates
Tssr121103	transcription start site region 121103	362 bp upstream
Tssr121104	transcription start site region 121104	389 bp upstream
Tssr121105	transcription start site region 121105	420 bp upstream