rs6365673 SNP Detail

Summary

• ID
  rs6365673
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149418771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTTC AAAGGCTAGC CTAGTCTACA
  Y
  GAGACATTAT GGCAAAAGAC CTGGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8771783	WI_WGS_4_144719347	WI	MOUSE	f	SNP	C	T
ss321425436	CHEV_4_148708423	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6365673					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149418771 () rs orientation: forward

Symbol	Name	Function Class
Tssr40324	transcription start site region 40324	336 bp upstream
Ube4b	ubiquitination factor E4B	within coordinates
Ube4bos2	ubiquitination factor E4B, opposite strand 2	325 bp upstream
Ube4bos3	ubiquitination factor E4B, opposite strand 3	325 bp upstream