rs6367567 SNP Detail

Summary

• ID
  rs6367567
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:126862197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         TCCTCCGCCA
  GTGGTTTTCT TAAAGGGATC TCCAAACCAG CCCCTTGCGC GCGCCCCTGA TGCGCAGGCG
  CGCCACAAGC CCCTCCTCCC TTTCCCACCA AGCCCCCGGT CCTGAGCGTG CGCGGTGAGT
  GGCCCAGGCT AGGCCTAATC CTGTTAGTCT CTTTGCTGCC AGCAGCTGCT CCCACCACTC
  AACTATGGCC GCTCCCTTAA AGGGACCATG ACGAAGGGAT GATGTCAGAA TGAAAGATCT
  K
  AATGGAAGGA CTATCTGGTG AAATGTCAGT GAGGGGTTCA CATCACCACC CTACACCTGA
  CTACAGAGAT ATTGCCAAAA GGAGAGAACC CTGATGAGCC AAAGTTCTCA GTGACCCTNT
  GAACATGAAG AATCCCAACC AAGAAGAAAA CAAGACTGTT ATCTGAAGGA GAAACCAACA
  GCTTGTCAAG TAAAGGGCGT CGACTCTCAA GGAACAACTT CCAACCTTAA AACCAGATCC
  ACTGGTAGTG                                                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8773683	WI_WGS_4_124332377	WI	MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6367567					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:126862197 () rs orientation: forward

Symbol	Name	Function Class
4933424C08Rik	RIKEN cDNA 4933424C08 gene	within coordinates
Cpgi14832	CpG island 14832	within coordinates
Gm68857	predicted gene, 68857	within coordinates
Rr398497	regulatory region 398497	38 bp downstream
Rr599780	regulatory region 599780	280 bp distal
Rr599781	regulatory region 599781	194 bp distal
Rr599782	regulatory region 599782	within coordinates
Tssr39026	transcription start site region 39026	23 bp upstream
Tssr43405	transcription start site region 43405	405 bp upstream
Tssr43406	transcription start site region 43406	290 bp upstream
Tssr43407	transcription start site region 43407	250 bp upstream
Tssr43408	transcription start site region 43408	227 bp upstream
Tssr43409	transcription start site region 43409	206 bp upstream
Tssr43410	transcription start site region 43410	168 bp upstream
Tssr43411	transcription start site region 43411	439 bp downstream
Zmym4	zinc finger, MYM-type 4	269 bp upstream