rs6369166 SNP Detail

Summary

• ID
  rs6369166
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5818689 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ATCAT GATATTTGGG CAAACTATGG
  Y
  AGGAAAAGGC AGGCTGTACA TATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8775283	WI_WGS_19_5054131	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6369166					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5818689 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi10479	CpG island 10479	1841 bp proximal
Rr363624	regulatory region 363624	1111 bp proximal
Scyl1	SCY1-like 1 (S. cerevisiae)	within coordinates