rs6369194 SNP Detail

Summary

• ID
  rs6369194
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5818663 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGGAA AAGGCAGGCT GTACATATGT
  R
  GTACCGGCAA TGCTTTCTTT CCTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8775311	WI_WGS_19_5054157	WI	MOUSE	f	SNP	A	G
ss325717448	CHEV_19_5768635	CHEVERUD	SCREENING_POP	r	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6369194					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5818663 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi10479	CpG island 10479	1867 bp proximal
Rr363624	regulatory region 363624	1137 bp proximal
Scyl1	SCY1-like 1 (S. cerevisiae)	within coordinates