rs6369524 SNP Detail

Summary

• ID
  rs6369524
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:80313096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTATTACT ATCAATATGT
  AGACTAATTA TTGTTCCAGT GGCTGGTGAA CATTGTAATT GAAAGAAAAT TTATAAAGGA
  CACAATCAAA CATTCTACTT TCTTAAAACA GCATTAGAAT CTATTATTAT TTAAATAGAA
  TCATATAAGT ACTATCTAAA CCTGAGAACT TTAAAGTAAT GGCAATCATG CCATATCAAA
  R
  TTTTCTAGGA AGTATTGCTT ATATGTGTTT TCCTTTGATA ATTTGTTGCT CCTTCCCTAT
  ATTCCATGTA TCCTTTTAAA ATCATGGTTA TTATTGTGGT TCATCGATTT TATAAGATAG
  AGCTTCTCTG GATCAAATCA CAAAACTAAA AATGGTGTGT CTGTGTCAGA CTGACATGTT
  AAATTGCATT TTTTATATCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8775641	WI_WGS_16_81128174	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6369524					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:80313096 () rs orientation: forward

Symbol	Name	Function Class
D16Mit203	DNA Segment, Chr 16, Massachusetts Institute of Technology 203	811 bp proximal