rs6371335 SNP Detail

Summary

• ID
  rs6371335
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:106805688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAATACTCT GATGTTTGCG
  TATGGCAGTA CATCATTAGT AGTCATTTTA TTGCCATGTT CTTTCAGCAG AATAATAGTA
  GTAGGTTTTT TCCCCTTTGC CAATGACCTA TCTAGTGTCA GGTTTTTAAT GCTAGAACCT
  GGAAGGAAAT CCTGTCAGAT ACCAACTTGG TTGGGGTTGG CGAGAGCGGC TTCTGTGACT
  Y
  CCCCTTTCCC CCATGGAGTT CACGTTTATA CCACACTTGC CCCAAATGTA ATTTCCTTCA
  GACAAATTTA CTTTCCTAGT TCCAGCATTA ATGTGTGGAC TTCATAAGGG CAGGCGCCTT
  GTCTTTCCAC CCTAGTGTCT ACAGTGTCTT ACAACTAAGC GCTCTGGATA TTTTTGGGTG
  AATAATCAAT TTCCAAAGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8777461	WI_WGS_1_107449942	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6371335					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:106805688 () rs orientation: forward

Symbol	Name	Function Class
Rr18766	regulatory region 18766	1687 bp distal
Rr371817	regulatory region 371817	1817 bp downstream
Serpinb5	serine (or cysteine) peptidase inhibitor, clade B, member 5	within coordinates