rs6374924 SNP Detail

Summary

• ID
  rs6374924
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:73931034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACGTTAA AGAACTGACA
  GCTAACAAGC CTTTCTGGTA GCAATCATTC CTCACTGAAA AAGAAACAAC AGAGCAAAGC
  AGCTTTCATT TAATTCCTAT TTTCTAACAT TTCTCCCTCC ATCTCGAAGT TCTACCTACC
  TGTAACTGCT GCAACATCTC CGTCACCCCT TGAACCTAGA GCATTTCACA CAGGGACAGG
  R
  GCTCATTGGG ATGACAATGA ATTCCTGGAG AGCAACAGAG AATTCCAGGG TTTCCAGCAC
  CCAGAGAGGA GACTAAAATA GAATGGGAAA CGTCTTTGTC ATTAGACTCC TACTAGATTC
  CTATGCTGTG GGAGGTGGAG GAGGCTCCCT AAAGAGGGTG GGGCAGAATA GAGCTTCTAG
  TTGGAGTCTA AGGAGATAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8781064	WI_WGS_4_71247478	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6374924					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:73931034 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14388	CpG island 14388	463 bp proximal
Frmd3	FERM domain containing 3	645 bp upstream
Rr101135	regulatory region 101135	within coordinates
Tssr37633	transcription start site region 37633	797 bp upstream