rs6375719 SNP Detail

Summary

• ID
  rs6375719
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121504365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                         ACCACAGCAA
  CGGGGTCAAG CAACCataga ttaatacctc tgaaaccatg ggccaaaata aacaaacctt
  tcctcttctt aagttgaatt atctcaggta tttnttagag tagtacaaag taccctaaga
  caCTTAGTGC CAAATATTTT AAAGTTTTTT TCTTTCTTTT AGGAAAATTA AAAAGAGGTA
  GAAGAACAGA ACAAAATTCA GGAAGTATGA TTCCAAAGAA ATATTAAAGA ACAGTTAATG
  M
  ACTCNATCTG AAAATAGGTT TAAAAGCAGC ATGTATCCAA GTTCTTGTAC CCATAATGCA
  TTGNGATGAA GCTAGTAGAC AAGGAGGAGG TTGACAGCTG TCAGAGGAGG ATCAGCCATG
  TCTGAACATC CAGTCCCACC CAGGGAGGGC TGAGGGCGGG AAGGTTGAGC TTCCTGAACA
  TCCATGCCTC CATGAGCCAC GTCCAAGGTG GCTGAGAACA CCACCCAGGC TGCAGTTCCT
  GAGCTCTGGA                                                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8781862	WI_WGS_3_122073248	WI	MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6375719					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121504365 () rs orientation: forward

Symbol	Name	Function Class
D3Mit288	DNA segment, Chr 3, Massachusetts Institute of Technology 288	1877 bp distal
Gm43607	predicted gene 43607	540 bp downstream
Gm43608	predicted gene 43608	470 bp upstream