rs6375935 SNP Detail

Summary

• ID
  rs6375935
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:73931193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGTCACCCC TTGAACCTAG
  AGCATTTCAC ACAGGGACAG GGGCTCATTG GGATGACAAT GAATTCCTGG AGAGCAACAG
  AGAATTCCAG GGTTTCCAGC ACCCAGAGAG GAGACTAAAA TAGAATGGGA AACGTCTTTG
  TCATTAGACT CCTACTAGAT TCCTATGCTG TGGGAGGTGG AGGAGGCTCC CTAAAGAGGG
  Y
  GGGGCAGAAT AGAGCTTCTA GTTGGAGTCT AAGGAGATAG GTCCATAAAA AAAATATTAA
  AAATTAAAAA ATCAAACTAT TTAAGAAAGA CAATTCCTAA CTAAAGATGG AAGACGAGGG
  CTGATCTCAG TTAATATTAA CTTTAAAATC GGCCAGGAAT ATCCGAGACT GTTACCACGG
  TCATGTGCAT GTGCAATGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8782080	WI_WGS_4_71247637	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6375935					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:73931193 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14388	CpG island 14388	304 bp proximal
Frmd3	FERM domain containing 3	486 bp upstream
Rr101135	regulatory region 101135	within coordinates
Tssr37633	transcription start site region 37633	638 bp upstream