rs6376687 SNP Detail

Summary

• ID
  rs6376687
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43857364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAT ACAAGCTCCA AAGCATTCAA
  R
  CATGAGCAGT TTCAATTCAT TTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
ss8782837	WI_WGS_18_43883169	WI	MOUSE	f	SNP				A	G
ss39606571	mCV24147698	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss147020808	ENSMUSSNP1684964	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss325601055	CHEV_18_43883953	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	LG/J	SM/J
rs6376687					SNP	G	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43857364 () rs orientation: forward

Symbol	Name	Function Class
Rr348914	regulatory region 348914	836 bp proximal
Rr393629	regulatory region 393629	306 bp upstream