rs6377563 SNP Detail

Summary

• ID
  rs6377563
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:4822032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTC TTCCATATTC ATACTAGGAT
  R
  ACCCATTAAG TCCCATTTAA AGCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss8783713	WI_WGS_14_12998318	WI	MOUSE	f	SNP	G		A
ss139164472	ENSMUSSNP5645126	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs6377563					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:4822032 () rs orientation: forward

Symbol	Name	Function Class
Rr288845	regulatory region 288845	1169 bp proximal
Rr389176	regulatory region 389176	1525 bp upstream