rs6383482 SNP Detail

Summary

• ID
  rs6383482
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:8254383 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                         AAaaaagaag
  taaggttcca atgactgcta cagggccaag gagggtaaga agccaagcta ccaaggggta
  gaagtgttgg gagcatagag tgctcagagg ttccactggg gctctttgag catttgtgga
  tcttgtgaat gcctggtgcc caagtggatc aaaagaggat gtcagattcc ctggaactag
  agttacagat gattgtgagc caccctgtgg gttgtgggaa ttaaaactgc attgtctgca
  Y
  gaacaaaaag angctcttca ccactgagcc atttctccan ccTTGGNACT ATGAATTTGA
  AAGTAAATGG GCTAGGGATA ACACATGAGG AGTTGGAAGG TTGAGAAAAT AGCAGTACAG
  GTTATAAACC GTACGCATTT ATGAACTTGT CAAATAAGTA CCTATTAGAA AAAGGAATAA
  AGTTACTGCA TGGTGCCAAG GTGTCCCGTC CCGCGAGATT CAGTTATTCG TGTGTACGAG
  GGAGACCGCA                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8789638	WI_WGS_5_5659654	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6383482					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:8254383 () rs orientation: reverse

Symbol	Name	Function Class
Adam22	a disintegrin and metallopeptidase domain 22	within coordinates
Gm55253	predicted gene, 55253	408 bp upstream