rs6383500 SNP Detail

Summary

• ID
  rs6383500
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  116
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:8254371 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                         aggttccaat
  gactgctaca gggccaagga gggtaagaag ccaagctacc aaggggtaga agtgttggga
  gcatagagtg ctcagaggtt ccactggggc tctttgagca tttgtggatc ttgtgaatgc
  ctggtgccca agtggatcaa aagaggatgt cagattccct ggaactagag ttacagatga
  ttgtgagcca ccctgtgggt tgtgggaatt aaaactgcat tgtctgcang aacaaaaaga
  Y
  gctcttcacc actgagccat ttctccancc TTGGNACTAT GAATTTGAAA GTAAATGGGC
  TAGGGATAAC ACATGAGGAG TTGGAAGGTT GAGAAAATAG CAGTACAGGT TATAAACCGT
  ACGCATTTAT GAACTTGTCA AATAAGTACC TATTAGAAAA AGGAATAAAG TTACTGCATG
  GTGCCAAGGT GTCCCGTCCC GCGAGATTCA GTTATTCGTG TGTACGAGGG AGACCGCAAA
  CCTGGAAGGA                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8789656	WI_WGS_5_5659666	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6383500					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:8254371 () rs orientation: reverse

Symbol	Name	Function Class
Adam22	a disintegrin and metallopeptidase domain 22	within coordinates
Gm55253	predicted gene, 55253	396 bp upstream