rs6383761 SNP Detail

Summary

• ID
  rs6383761
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:78240037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTCTTTGT GGGTGATCTC
  ATTAATCTTT GTTAGCAGTT CAGTCCTGTA GCAAACAGCA AATAAGAATC AACAGCTTCA
  ATCCAGCCCT CTTGGCAGGC AGACACCATG CATGAGCCAG CAGCTATACA GTTCAATCCT
  GAAGAAAGTA CAAGGCTTGA GAACCGGCCT GAGGCCACTG AAGTGGCAAT CTGCAGGAAC
  Y
  ACACTAGCAA TTCTTTGGAG AGTTTCTCTC AGTGGTGGCA TTACCACAAG CAGAGCTCAA
  CAATGCTATG TAAGGCGAAC CAATACATGT CCTTAGTGAA GAATAGCGAG GTGGAGCAAA
  GCAAACCAAT GCTCCAGCTC TCACTGTCTG TGGAGTTATA TTTATATTCC TTCATCATGT
  CATTTCTCAA TGTCTGCTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8789917	WI_WGS_12_72870792	WI	MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6383761					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:78240037 () rs orientation: forward

Symbol	Name	Function Class
Ccdc196	coiled-coil domain containing 196	979 bp upstream
Gm59517	predicted gene, 59517	within coordinates
Tssr114034	transcription start site region 114034	962 bp upstream