rs6386170 SNP Detail

Summary

• ID
  rs6386170
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3665838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATATGTCC TCTCCCAGTG
  TCATCAGAGA TCATTCTGGG TTGTGCACTG ACCCAGGACA GAGGCCAACA AGCAGTGGTG
  TCCCCAGCAG GAGTGGGACA GTGCAGCAGA CCCAGAAGAA AGCAAAAGCT GTGACAGAGC
  GTGCTCTCCA GCAGGAGTTG GCTTTGGCAC AGCATCCCAG GAGATTCAGC TCATGCAAAA
  R
  GAGGGGTGCT GCTGGTTGCT GTAGCTGTAC TGACAGTTGG CCAGCTGCTA TGCTGGCTTC
  GTTCCTGCAT ATCCAATGCC AGTCATCTTT TGCCTTCACC TCCAGCTCAC CTTCTCTGGT
  TCTAAAGCCC TCTACCTTCA CTTCCTCCAA TGTAAGGCAG TATAACTAGG AACCAGACAT
  AAATTCTATA ACAACAGAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8792326	WI_WGS_10_3599479	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6386170					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3665838 () rs orientation: forward

Symbol	Name	Function Class
Gm56946	predicted gene, 56946	1877 bp upstream
Rr426848	regulatory region 426848	1982 bp proximal