rs6386604 SNP Detail

Summary

• ID
  rs6386604
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:41375850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTTATGGA ATTCTGCACC
  GAGGCCTGAC TATTGTCTTG AGAATGTTTA GTTCTCAAGT GTCTTATTTA CTTCCTCATT
  TCTGGGATAA AATACCTCAA CAAATGTAAC TTAAAAAAGA AAGTACTGAT TTTGGCTCCC
  AGTCCCAGAA CTACAATCTT TTATTGTGGA AAGACATGGC AGACAAGAAA GGCCATCATG
  S
  GGGAAACTGG AAATTGAGTC GTTACACTTC CTGTACACTC CAAGTCTAGA GTGAACAGGT
  GCAGTCAGAT TATAAAGCCT CAAGTCCCAC ATCCTGTGGG TTATCTTCTG CCCTGCAGCC
  TGAAGGTTAT ATAACCTCCC AGAACAGTGC TGCAAATTGG GGATTAAGTA TTCAAATATG
  GGAGTCTGTA GGGGCCCATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
ss8792760	WI_WGS_12_35486417	WI	MOUSE	f	SNP			C	G
ss137658800	ENSMUSSNP5208132	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C			C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	CZECHII/EiJ	DBA/2J	MSM/Ms
rs6386604					SNP	C	C	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:41375850 () rs orientation: forward

Symbol	Name	Function Class
Gm47376	predicted gene, 47376	within coordinates
Immp2l	IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	within coordinates
Rr387110	regulatory region 387110	within coordinates