rs6413185 SNP Detail

Summary

• ID
  rs6413185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  116
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102356387 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTAGGAG AGATCAGGAG
  CAGAGCCTGG GGCCAGAAGA CAAGGGTCCA GGGGTAACTA GAAAAAACAA GGCCCACTGG
  GAAGCCGAGG GACACTCAGA GAACTCAGCC CCATGGAGTT AGGATGTGAC CACGTGGAGT
  CAAGGACTGA CCCTCTCCTA GCTCAGAGGA CCAGGAGCAT GGAGCCCACG AACGCAATGT
  R
  GATTTAGCCA CCAGAGGGCG ATAGAGGGCC CGGGGAGTGT GGGGCAAGGA CAGTAGGGGA
  GGGTTAGAAA GTAGAGTGAT GAAATAGCGG GCAAAGGCAG GCATCCTTGG CCACTCTTTG
  GGAAACTGGA ATAACAAGGG GAGCCAGTAG ATAGGGATGG AAATGCAAGA GGAAATGGTG
  CTGCCCACGG GGGTAACAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CZECHII/EiJ
ss8819404	WI_WGS_9_103214344	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CZECHII/EiJ
rs6413185					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102356387 () rs orientation: forward

Symbol	Name	Function Class
Gm68206	predicted gene, 68206	within coordinates
Rr192160	regulatory region 192160	within coordinates
Rr202365	regulatory region 202365	1160 bp distal
Rr202366	regulatory region 202366	within coordinates