rs8236555 SNP Detail

Summary

• ID
  rs8236555
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25597051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAACAAGA AGCATCACTC
  CCAGTGCCCT TTTGTCCTAT GTATCTGTTT CATGGTGTCC TTGCCAACAT CTACAGTGAG
  GGTAAGGGAA TGAGGAGTGA GCAGCCAAAG CAGGGAGTTG CTATGGCTCC TCACGCTCTG
  GACAATGAGA GACAGGAGGC GGGAACAGCT GAAGTTGCAT AACTGAGTGG AGAGGCGGGG
  Y
  CAGCATAAAA GATCCTGCTG GAGCGTGGAG TGAAGTCAAC ATTGGTTAGA CCAGGACCAT
  GGAGCCCAGT GTCCTGCTCC TCCTTGCTCT CCTTGTGGGC TTCTTGTTAC TCTTAGCCAG
  GGGACACCCA AAGTCCCGTG GCAACTTCCC ACCAGGACCC CGTCCCCTGC CCCTCTTGGG
  GAACCTCTTG CAGATGGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12753402	Cyp2b10_1_JC3930_3	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T
ss12755174	Cyp2b10_1_AN2681_1	ROCHEBIO	RPAMM	r	SNP	G			G		G	G	G	G		G		G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8236555					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25597051 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	32 bp upstream
Rr164530	regulatory region 164530	within coordinates
Tssr65172	transcription start site region 65172	25 bp upstream
Tssr65173	transcription start site region 65173	1949 bp upstream