rs8236556 SNP Detail

Summary

• ID
  rs8236556
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25597050 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAAACAAG AAGCATCACT
  CCCAGTGCCC TTTTGTCCTA TGTATCTGTT TCATGGTGTC CTTGCCAACA TCTACAGTGA
  GGGTAAGGGA ATGAGGAGTG AGCAGCCAAA GCAGGGAGTT GCTATGGCTC CTCACGCTCT
  GGACAATGAG AGACAGGAGG CGGGAACAGC TGAAGTTGCA TAACTGAGTG GAGAGGCGGG
  K
  CCAGCATAAA AGATCCTGCT GGAGCGTGGA GTGAAGTCAA CATTGGTTAG ACCAGGACCA
  TGGAGCCCAG TGTCCTGCTC CTCCTTGCTC TCCTTGTGGG CTTCTTGTTA CTCTTAGCCA
  GGGGACACCC AAAGTCCCGT GGCAACTTCC CACCAGGACC CCGTCCCCTG CCCCTCTTGG
  GGAACCTCTT GCAGATGGAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12753401	Cyp2b10_1_JC3930_2	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	T	G	G	G	G	T
ss12755175	Cyp2b10_1_AN2681_2	ROCHEBIO	RPAMM	r	SNP	C			C		C	C	C	C		C		C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8236556					SNP	G	G	G	G	G	G	G	G	G	T	G	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25597050 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	33 bp upstream
Rr164530	regulatory region 164530	within coordinates
Tssr65172	transcription start site region 65172	26 bp upstream
Tssr65173	transcription start site region 65173	1950 bp upstream