rs8236559 SNP Detail

Summary

• ID
  rs8236559
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25596693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTCTGGAG AAATTATATC
  TGCAGACCTT AAAAAAACCT GGATCAGGGA ATGAACAGGC AGAGACAAAC AAAAGATCAT
  GGGACACTAC TCTTGTCAAG CCAAATGTAA TCACGTTTAC CCAGGACATA AAGAACATAC
  AGAGAGGCCT CCATAATTTA AGATTAGACA TGTAAATACA CCCCAGACAT GTAAGAATAG
  R
  TTAGGTAGCA CATCTAGACT CAGACACAGA AATACACATC CGTACATTCA TCTCAGAAAT
  GACCTTTCAG GTATTAAAAG CGTACAGCAC ACCCGCAGTC TCTTGTCCCA GTAAGTGAAC
  AGACAAAACT GAGCTGACAA GGGCACACCC ACCTCCATAA AACAAGAAGC ATCACTCCCA
  GTGCCCTTTT GTCCTATGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12753398	Cyp2b10_1_JC3929_7	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A
ss12755159	Cyp2b10_1_AN2676_7	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8236559					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25596693 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	390 bp upstream
Rr164529	regulatory region 164529	1649 bp distal
Rr164530	regulatory region 164530	79 bp proximal
Tssr65172	transcription start site region 65172	383 bp upstream