rs8236561 SNP Detail

Summary

• ID
  rs8236561
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25596671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGGCCAGA GAGTGAAATG
  GGGGCTCTGG AGAAATTATA TCTGCAGACC TTAAAAAAAC CTGGATCAGG GAATGAACAG
  GCAGAGACAA ACAAAAGATC ATGGGACACT ACTCTTGTCA AGCCAAATGT AATCACGTTT
  ACCCAGGACA TAAAGAACAT ACAGAGAGGC CTCCATAATT TAAGATTAGA CATGTAAATA
  M
  ACCCCAGACA TGTAAGAATA GATTAGGTAG CACATCTAGA CTCAGACACA GAAATACACA
  TCCGTACATT CATCTCAGAA ATGACCTTTC AGGTATTAAA AGCGTACAGC ACACCCGCAG
  TCTCTTGTCC CAGTAAGTGA ACAGACAAAA CTGAGCTGAC AAGGGCACAC CCACCTCCAT
  AAAACAAGAA GCATCACTCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12752068	Cyp2b10_1_AN2676_5	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	C	C	A
ss12753396	Cyp2b10_1_JC3929_5	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8236561					SNP	C	C	C	C	C	C	C	C	C	A	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25596671 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b10	cytochrome P450, family 2, subfamily b, polypeptide 10	412 bp upstream
Rr164529	regulatory region 164529	1627 bp distal
Rr164530	regulatory region 164530	101 bp proximal
Tssr65172	transcription start site region 65172	405 bp upstream