rs8236818 SNP Detail

Summary

• ID
  rs8236818
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110846467 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTGCC CGCACAAAAG TGGAGTCTGT
  R
  TTTGGTGCTA GAATCCCAGC TGGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12735029	M74778_JC1898_1	ROCHEBIO	RPAMM	f	SNP	G			G	A	G			A	A
ss12735030	M64423_JC1908_1	ROCHEBIO	RPAMM	r	SNP	C	C	C		T	C		C	T	T		C
ss136961096	ENSMUSSNP7218984	ENSEMBL	ENSEMBL_Sanger	r	SNP		C				C
ss323195401	CHEV_9_110919903	CHEVERUD	SCREENING_POP	r	SNP							C				C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8236818					SNP	G	G	G	G	A	G	G	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110846467 () rs orientation: reverse

Symbol	Name	Function Class
Ltf	lactotransferrin	1893 bp upstream
Rr687278	regulatory region 687278	1633 bp proximal
Tssr87456	transcription start site region 87456	1885 bp upstream
Tssr91676	transcription start site region 91676	232 bp upstream