rs8237033 SNP Detail

Summary

• ID
  rs8237033
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170796497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCACTATT AAGAGGTGTG
  GCCTTGTTGG AGTAGGTGTG GCCTTTTGGA GGAAGTGGGT CGCTGGGTTG GCTTTGAGGT
  TTCAGATGCT CAAGCCAGGC CCAGTGCCAC TCTCTCTTCC TGCTGCCTAC AGATCCAGAT
  GTAGAACACT CAGCTACCCT TCCAGCACCA TGCCTGCCTG GATGCTGCCA TGCTTCCTGC
  Y
  GTGATGATAA TGGACTGAAC CTCTGAACTG TAAGGAACTC CTCAATTAAA TGTTGTTGCA
  ATCATGGTGC CTCTACACAG AAATAGAAAC CCTAACTAAG ACACCTTTCT TGCTACAGCA
  CATTAGAAGT TACTCCTCAT ATCAAACTCG ACCCCTGTGC CCATTAACCA CTTTGTCTTC
  ATCCTTACCT CTCCTCCACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12736696	Fcgr2b_1_JC4894_1	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T		T	T		T	T	C
ss12741078	Fcgr2b_2_JC4909_2	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8237033					SNP	T	T	T	T	T	T	T	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170796497 () rs orientation: forward

Symbol	Name	Function Class
D1Dcr16	DNA Segment, Chr 1, Derry C. Roopenian 16	935 bp proximal
D1Mit148	DNA segment, Chr 1, Massachusetts Institute of Technology 148	955 bp proximal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	497 bp distal
Rr25626	regulatory region 25626	1606 bp proximal
Rr372438	regulatory region 372438	within coordinates
Tssr14958	transcription start site region 14958	703 bp upstream