rs8237038 SNP Detail

Summary

• ID
  rs8237038
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170796957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAAGAGAG TGAAGGGCAG
  TTGAGAACAA GGACAGTTTG TGATAACTGG CCACATCTCA CTCTAACAGG ACTAGAAGAG
  TTGATATCCT AGCTAGCCAT GGCTTCTGAT CATCTTCCTT CCCGGGCAGA GAGAAGGAGA
  AGTGCAGGGC ATCTTCTGAG AACAATGGTC CATTCCTGGT CCTGACCTGA TACTGAGCCC
  R
  GTTGCTGATC CATTCAGAGC AGCTCCAGAC AGACAAAGAG ACGGTGACAA AGAAGAGAGT
  GAGGAGATAT AAAAAGAAGA CTTACCATGA GTCCCAGCAG CAAGATCTGT AAGAAAGGAA
  GTAAGCATCA ACCAGGGCCT TCTGTACTGA GACATGCCTA CCCAGACCCA GAGCCCCAAC
  TCACTCCCAC AGCCCACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12732936	Fcgr2b_1_JC4870_5	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G		G	G	G	A	G		G	G	G
ss12741082	Fcgr2b_2_JC4910_1	ROCHEBIO	RPAMM	r	SNP			C		C	C		C	C	T	C	C	C		C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8237038					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170796957 () rs orientation: forward

Symbol	Name	Function Class
D1Dcr16	DNA Segment, Chr 1, Derry C. Roopenian 16	475 bp proximal
D1Mit148	DNA segment, Chr 1, Massachusetts Institute of Technology 148	495 bp proximal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr372438	regulatory region 372438	392 bp downstream
Tssr14958	transcription start site region 14958	1163 bp upstream