rs8237045 SNP Detail

Summary

• ID
  rs8237045
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171043776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATC GACAGAAAGT GTGCAGGGAT
  Y
  CCCCTGCCAT CAGGAAACAT TAATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12734945	AF009326_JC1877_2	ROCHEBIO	RPAMM	f	SNP				C		T		C	C	T		C		C	C	C		C
ss12745385	Fer1g_5_AN2514_2	ROCHEBIO	RPAMM	f	SNP	C		C	C	T		C	C	C		T	C		C	C	C
ss119996325	PARCsnp_1.12240	PARC_SEQ	INBRED	f	SNP										T		C
ss119997994	PARCsnp_1.01265	PARC_SEQ	INBRED	f	SNP										T		C
ss146157124	ENSMUSSNP1487621	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss320117261	CHEV_1_173146338	CHEVERUD	SCREENING_POP	f	SNP													C				C
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8237045					SNP	C	C	C	C	T	T	C	C	C	T	T	C	C	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171043776 () rs orientation: forward

Symbol	Name	Function Class
Nr1i3	nuclear receptor subfamily 1, group I, member 3	within coordinates
Tomm40l	translocase of outer mitochondrial membrane 40-like	within coordinates