rs8237046 SNP Detail

Summary

• ID
  rs8237046
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171043788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGT GCAGGGATTC CCCTGCCATC
  W
  GGAAACATTA ATTCAATGAA GTCCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12734946	AF009326_JC1877_3	ROCHEBIO	RPAMM	f	SNP	T			T		A		T	T	A		T		T	T	T		T
ss12745386	Fer1g_5_AN2514_3	ROCHEBIO	RPAMM	f	SNP	T		T	T	A		T	T	T		A	T		T	T	T
ss119997996	PARCsnp_1.01266	PARC_SEQ	INBRED	f	SNP										A		T
ss146157129	ENSMUSSNP4820204	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss320117262	CHEV_1_173146350	CHEVERUD	SCREENING_POP	f	SNP													T				T
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8237046					SNP	T	T	T	T	A	A	T	T	T	A	A	T	T	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171043788 () rs orientation: forward

Symbol	Name	Function Class
Nr1i3	nuclear receptor subfamily 1, group I, member 3	within coordinates
Tomm40l	translocase of outer mitochondrial membrane 40-like	within coordinates