rs8237400 SNP Detail

Summary

• ID
  rs8237400
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62314001 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AATTG TAAAACTGAA AATGGTTGCA
  Y
  TTGCATTTTT ATTTTCAGCA CATCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12748383	X15643_364B_4	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C		C	C	T		C
ss12752309	X15643_JC688_2	ROCHEBIO	RPAMM	r	SNP	G		G	G	G		G	G	G	G	G		G		A
ss325649289	CHEV_18_62340584	CHEVERUD	SCREENING_POP	r	SNP												G				A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8237400					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62314001 () rs orientation: reverse

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	971 bp upstream
Cpgi10125	CpG island 10125	310 bp distal
Gm9949	predicted gene 9949	within coordinates
Rr393783	regulatory region 393783	within coordinates
Rr539065	regulatory region 539065	1907 bp distal
Rr539066	regulatory region 539066	725 bp distal
Rr539067	regulatory region 539067	105 bp distal
Tssr151487	transcription start site region 151487	748 bp downstream
Tssr151488	transcription start site region 151488	1996 bp upstream
Tssr153623	transcription start site region 153623	944 bp upstream