rs8237402 SNP Detail

Summary

• ID
  rs8237402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62310577 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTGAC TCACGGAAAC AGAGTTATGG
  R
  CATATGTTTT TGTCCCCATA TGCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
ss12732026	X15643_364F_1	ROCHEBIO	RPAMM	f	SNP				A			A		G		G
ss12738234	X15643_JC698_3	ROCHEBIO	RPAMM	f	SNP	A			A	G	G	A	G	G	G	G
ss39604389	mCV23224893	ABI	CRAMUS_MOUSE	r	SNP		T	T	T							C
ss147265756	ENSMUSSNP5719550	ENSEMBL	ENSEMBL_Sanger	r	SNP			T	T							C
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J
rs8237402					SNP	A	A	A	A	G	G	A	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62310577 () rs orientation: reverse

Symbol	Name	Function Class
Adrb2	adrenergic receptor, beta 2	310 bp downstream
Cpgi10125	CpG island 10125	1460 bp proximal
Rr539062	regulatory region 539062	within coordinates
Rr539063	regulatory region 539063	1018 bp distal
Rr539064	regulatory region 539064	1385 bp proximal
Rr539065	regulatory region 539065	1496 bp proximal
Tssr153622	transcription start site region 153622	354 bp downstream