rs8238529 SNP Detail

Summary

• ID
  rs8238529
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170794688 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              AGGCTCCTGG CAAAAAGTAG
  GTTTCCCTTC TAGAAGAACT ACCAGGTGCT ATTAGCAACT GCTATTGCTG TCGTTTTACG
  TAGTTCCCTC CTATCATCCG GTCCAGGGTT TCCTCAATGG TATACCCACA GCAAGCTAAC
  GATTTGCTCC AACCCTGCTT GGACTGTGGT TCCACATTTA TTACTAATCA TTAGAGACAC
  S
  GACAGTTTTG GAGGTTCAAG CTGTTCTTCC ATCCCCCAAA TGGAAGACTC TGTTGTATCT
  GCTTCATACT TGTCTCCTCT GGCCGACTGA ATTCCTTCAT CTTTCCTGCC AAGAAGGGAG
  GAATCGCATC CCCATCTCAG GAGAGGAAGG GCAACACGCG TGTATCTTGG ATACCTGTTG
  CGCGCCATGA ACTACTGTCG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12732923	Fcgr2b_1_JC4867_1	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8238529					SNP	C	C	C	C	C	C	C	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170794688 () rs orientation: reverse

Symbol	Name	Function Class
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	713 bp proximal
Rr372438	regulatory region 372438	within coordinates
Tssr14956	transcription start site region 14956	1308 bp upstream
Tssr14957	transcription start site region 14957	596 bp upstream
Tssr14958	transcription start site region 14958	1085 bp downstream