rs8238532 SNP Detail

Summary

• ID
  rs8238532
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170795375 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CACCC GTTTCCGCTT TTGCCAGCCC
  Y
  TGTGCTCAGC CTGCAGTGGA GGGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	LG/J	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
ss12732927	Fcgr2b_1_JC4868_2	ROCHEBIO	RPAMM	f	SNP		C	C	T	T	C	T	T		C	C		T
ss44939919	mCV24426920	ABI	CRAMUS_MOUSE	r	SNP	G		G				A
ss146149177	ENSMUSSNP2347877	ENSEMBL	ENSEMBL_Sanger	r	SNP	G		G
ss320115071	CHEV_1_172897937	CHEVERUD	SCREENING_POP	r	SNP									G			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	LG/J	NZB/BlNJ	NZW/Lac	SM/J	SPRET/EiJ
rs8238532					SNP	C	C	C	T	T	C	T	T	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170795375 () rs orientation: reverse

Symbol	Name	Function Class
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	26 bp proximal
Rr372438	regulatory region 372438	within coordinates
Tssr14956	transcription start site region 14956	1995 bp upstream
Tssr14957	transcription start site region 14957	1283 bp upstream
Tssr14958	transcription start site region 14958	398 bp downstream