rs8239067 SNP Detail

Summary

• ID
  rs8239067
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89247425 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CCACT GCCTGCCAAC CCACAGGGCC
  R
  GCACCCACCA GGTGACCTGC CTGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	AKR/J	BALB/cJ	CAST/EiJ	NZB/BlNJ	NZW/Lac
ss12733528	AB022089_BS255_3	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	AKR/J	BALB/cJ	CAST/EiJ	NZB/BlNJ	NZW/Lac
rs8239067					SNP	A	A	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89247425 () rs orientation: reverse

Symbol	Name	Function Class
4731419I09Rik	RIKEN cDNA 4731419I09 gene	within coordinates
Adam15	ADAM metallopeptidase domain 15	within coordinates
Cpgi13423	CpG island 13423	1897 bp distal
Rr580050	regulatory region 580050	1600 bp distal
Rr580051	regulatory region 580051	518 bp distal
Rr580052	regulatory region 580052	553 bp proximal
Tssr30091	transcription start site region 30091	469 bp downstream
Tssr34117	transcription start site region 34117	22 bp downstream
Tssr34118	transcription start site region 34118	317 bp downstream