rs8240120 SNP Detail

Summary

• ID
  rs8240120
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:4091738 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TCCTT GTACTCGAAA TTGCTTTGAG
  R
  CTGGGCCTTT ACACTATCCC CCAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12734744	U15654_JC1574_1	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8240120					SNP	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:4091738 () rs orientation: reverse

Symbol	Name	Function Class
Gstp2	glutathione S-transferase, pi 2	within coordinates
Rr357953	regulatory region 357953	1263 bp proximal
Rr363269	regulatory region 363269	within coordinates
Tssr157438	transcription start site region 157438	492 bp downstream
Tssr157439	transcription start site region 157439	505 bp downstream