rs8240355 SNP Detail

Summary

• ID
  rs8240355
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110846487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGATACAA AGATGCTTCA
  TTGCACCCGA GAGTTAGCCA ACTGTGTGTT TCTTCACAAT TTTTTGAAAT GGCTCGTTGC
  AATTATAGAT GAAAGCAACT TCTGACGTTG CATTATATTG TTTCCAAATG AGGGACCCTG
  GATCTGTCAC CAAAACCCCA GCTGGGATTC TAGCACCAAA TACAGACTCC ACTTTTGTGC
  R
  GGCAAACAGG AAGCCTGATT TGACCTCATG TTTGTATCTC ATTAAGACTC TGCCCCAGGC
  ATGAGAGGCC TCACAGGTTC AAGCTGGGCC TGCTCCTTAG GGCTGAGTGT CCCTTGGCAG
  TGCTGGCTTA CTAGGGTACC TTCTGCTCCA GAAATATGTT CCTTATTGCC AGTGATTTAA
  GCTCTGTCCA TGTCTGCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12735031	M64423_JC1908_2	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8240355					SNP	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110846487 () rs orientation: forward

Symbol	Name	Function Class
Ltf	lactotransferrin	1873 bp upstream
Rr687278	regulatory region 687278	1613 bp proximal
Tssr87456	transcription start site region 87456	1865 bp upstream
Tssr91676	transcription start site region 91676	252 bp upstream