rs8240369 SNP Detail

Summary

• ID
  rs8240369
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110848050 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTTTC TAGAGGTGGG ACATGGGGTA
  R
  GGGGTCTATA TTTGTGGGTT ACCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12735045	M64423_JC1913_13	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8240369					SNP	G	G	G	G	G	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110848050 () rs orientation: reverse

Symbol	Name	Function Class
Ltf	lactotransferrin	310 bp upstream
Rr687278	regulatory region 687278	50 bp proximal
Tssr87456	transcription start site region 87456	302 bp upstream
Tssr87457	transcription start site region 87457	1961 bp upstream
Tssr91676	transcription start site region 91676	1815 bp upstream