rs8242925 SNP Detail

Summary

• ID
  rs8242925
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153781331 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                            TTTCAAA
  AGGCAGTAGC NTTATTGGTA AAAGGTGTGC TCTGTGCCTG NCCTGTCNCC TGGGTGTGCC
  M
  CCTAACACCC TNTNTTGGGG TTTCATTTTC TTATTTGTGA AAATGAAGGT TTTTTTGGTT
  TGNTTTTTTT TGtttttttt tttccaagac agagtttctc tgtgtagccc tggctgtcct
  ggaactcact ctgtagacca ggctggcctt gaactcanaa atctgcctgc ctctgcctcc
  caagtgctgg gatcaaaggt gtgcgccacc atgccctgcC AAAATGAAGG TNGTTAATAC
  CNTAAACTCA AATGGTTATT TT                                         
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	SPRET/EiJ
ss12737715	Glns_JC4973_2	ROCHEBIO	RPAMM	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	SPRET/EiJ
rs8242925					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153781331 () rs orientation: forward

Symbol	Name	Function Class
A930039A15Rik	RIKEN cDNA A930039A15 gene	within coordinates
Glul	glutamate-ammonia ligase	within coordinates
Tssr9503	transcription start site region 9503	956 bp downstream