rs8242926 SNP Detail

Summary

• ID
  rs8242926
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153781343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                               TTTCAAAAG GCAGTAGCNT
  TATTGGTAAA AGGTGTGCTC TGTGCCTGNC CTGTCNCCTG GGTGTGCCNC CTAACACCCT
  Y
  TNTTGGGGTT TCATTTTCTT ATTTGTGAAA ATGAAGGTTT TTTTGGTTTG NTTTTTTTTG
  tttttttttt tccaagacag agtttctctg tgtagccctg gctgtcctgg aactcactct
  gtagaccagg ctggccttga actcanaaat ctgcctgcct ctgcctccca agtgctggga
  tcaaaggtgt gcgccaccat gccctgcCAA AATGAAGGTN GTTAATACCN TAAACTCAAA
  TGGTTATTTT                                                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ
ss12737716	Glns_JC4973_3	ROCHEBIO	RPAMM	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ
rs8242926					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153781343 () rs orientation: forward

Symbol	Name	Function Class
A930039A15Rik	RIKEN cDNA A930039A15 gene	within coordinates
Glul	glutamate-ammonia ligase	within coordinates
Tssr9503	transcription start site region 9503	968 bp downstream