rs8242927 SNP Detail

Summary

• ID
  rs8242927
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153781345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                            T TTCAAAAGGC AGTAGCNTTA
  TTGGTAAAAG GTGTGCTCTG TGCCTGNCCT GTCNCCTGGG TGTGCCNCCT AACACCCTNT
  Y
  TTGGGGTTTC ATTTTCTTAT TTGTGAAAAT GAAGGTTTTT TTGGTTTGNT TTTTTTTGtt
  tttttttttc caagacagag tttctctgtg tagccctggc tgtcctggaa ctcactctgt
  agaccaggct ggccttgaac tcanaaatct gcctgcctct gcctcccaag tgctgggatc
  aaaggtgtgc gccaccatgc cctgcCAAAA TGAAGGTNGT TAATACCNTA AACTCAAATG
  GTTATTTT                                                         
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ
ss12737717	Glns_JC4973_4	ROCHEBIO	RPAMM	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ
rs8242927					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153781345 () rs orientation: forward

Symbol	Name	Function Class
A930039A15Rik	RIKEN cDNA A930039A15 gene	within coordinates
Glul	glutamate-ammonia ligase	within coordinates
Tssr9503	transcription start site region 9503	970 bp downstream