rs8242930 SNP Detail

Summary

• ID
  rs8242930
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153782204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTAGGCCT GGGTCAGTCT
  CTCCTGTGAC CAGCACTGGA GCTGTGTGAG AGGGCTCTAG TCCTGATGGC ATGTTGATTC
  TTTATTTCTA GAGACCAACT TGAGGCACAT CTGTAAACGG ATAATGGACA TGGTGAGCAA
  CCAGCACCCC TGGTTTGGAA TGGAGCAGGA ATATACTCTT ATGGGAACAG ACGGCCACCC
  R
  TTTGGTTGGC CTTCCAATGG CTTCCCTGGA CCCCAAGGTA CGTCCCACTG GGTAAAGGGT
  GAAACTTCCT CCCCTAAGTT GTTACTGTCC AGGAAATCCC CTTCCCCAGA GATAGGTGCA
  ATCCTGAAAT GAGAAAATGG AGACCAGCAG CAGAATCTTA ACAGTAGACC GACCTTGCAT
  CCCTCACATC CAGAGGTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12737720	Glns_JC4974_2	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8242930					SNP	A	A	A	A	A	A	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153782204 () rs orientation: forward

Symbol	Name	Function Class
A930039A15Rik	RIKEN cDNA A930039A15 gene	751 bp downstream
Glul	glutamate-ammonia ligase	within coordinates
Tssr9503	transcription start site region 9503	1829 bp downstream
Tssr9504	transcription start site region 9504	1472 bp upstream
Tssr9505	transcription start site region 9505	1935 bp upstream