rs8242931 SNP Detail

Summary

• ID
  rs8242931
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153782321 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CTCCA TTTTCTCATT TCAGGATTGC
  M
  CCTATCTCTG GGGAAGGGGA TTTCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12737721	Glns_JC4975_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	C		A	A	C
ss45082673	mCV24628070	ABI	CRAMUS_MOUSE	r	SNP		T					T		G
ss145751898	ENSMUSSNP2000780	ENSEMBL	ENSEMBL_Sanger	r	SNP		T							G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8242931					SNP	A	A	A	A	A	A	A	C	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153782321 () rs orientation: reverse

Symbol	Name	Function Class
A930039A15Rik	RIKEN cDNA A930039A15 gene	868 bp downstream
Glul	glutamate-ammonia ligase	within coordinates
Tssr9503	transcription start site region 9503	1946 bp downstream
Tssr9504	transcription start site region 9504	1355 bp upstream
Tssr9505	transcription start site region 9505	1818 bp upstream
Tssr9506	transcription start site region 9506	1924 bp upstream