rs8242935 SNP Detail

Summary

• ID
  rs8242935
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153781068 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              TGAAACAGAA GCACTGAAGG
  CCCAGGGCCA CCAAGCCTTA CTGGCATTGC TAGAAGATAT TTCACAGAAG TGAGACTTCC
  CCAGGTTCAA AGCTATCTGA AAACGGAGAT GGATAGCACA GTGCAAACTA AACTCCACGC
  ATGTGCAGGC AGGGTAAATG CACATCCCGA AGTCTCGATG CTCATACTTG TGAGTATTCA
  S
  ACTCAACAAG CTGTCTGGCA TAAAATAGTA ACCGATAGTT AACGTGCAGT ACTCCCAAGT
  GATTGTGGCA CACGGTCATT CATGTGATCT TCCAATGACT TCGGGATGGG CTCTTATCAG
  AGAAGACTAC TGAGACGGCT CAGTGGGTAA AGGTGTTGCC ACTCGAGCCT GGCAACCTGA
  GTTCCACCTC CAGAGCTCAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac
ss12737725	Glns_JC4976_1	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac
rs8242935					SNP	G	G	G	G	G	G	G	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153781068 () rs orientation: reverse

Symbol	Name	Function Class
A930039A15Rik	RIKEN cDNA A930039A15 gene	within coordinates
Glul	glutamate-ammonia ligase	within coordinates
Tssr9503	transcription start site region 9503	693 bp downstream