rs8242936 SNP Detail

Summary

• ID
  rs8242936
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153781049 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TATTC AGACTCAACA AGCTGTCTGG
  S
  ATAAAATAGT AACCGATAGT TAACG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac
ss12737726	Glns_JC4976_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	G		C	C	C
ss45026636	mCV24628093	ABI	CRAMUS_MOUSE	r	SNP			G					G		C
ss145751885	ENSMUSSNP801398	ENSEMBL	ENSEMBL_Sanger	r	SNP			G							C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac
rs8242936					SNP	C	C	C	C	C	C	C	C	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153781049 () rs orientation: reverse

Symbol	Name	Function Class
A930039A15Rik	RIKEN cDNA A930039A15 gene	within coordinates
Glul	glutamate-ammonia ligase	within coordinates
Tssr9503	transcription start site region 9503	674 bp downstream