rs8245056 SNP Detail

Summary

• ID
  rs8245056
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170794313 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                 TTGCGCG CCATNNACTA
  CTGTCGCNGT GAAATCTGAN CATGTCTATt ttcacagatg aagaaagtga ggcccagaag
  ccttaacttt cttgccccaa attgaagagc tcncaaanga ntggagctag aaacagagat
  cgactgcctg acgtcaaact aaagctctcc cccttagcAT ATCGCATCCC ACTAGGAAGA
  R
  NCGACCTGAC CCTCTGAGTG CTATGGTCCT TTCNTGTCTT TCAGACTGGC TGCTGCTCCA
  GACCCCTCAG CTGGTGTTTC TGGAAGGGGA AACCATCACG CTAAGGTGCC ATAGCTGGAG
  GAACAAACCA CTGAACAGGA TCTCGTTCTT CCATAATGAA AAATC                
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12740121	Fcgr2b_1_JC4883_4	ROCHEBIO	RPAMM	f	SNP	A	A	A	G	G	A	G	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8245056					SNP	A	A	A	G	G	A	G	G	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170794313 () rs orientation: reverse

Symbol	Name	Function Class
D1Mit147	DNA segment, Chr 1, Massachusetts Institute of Technology 147	1667 bp distal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	1088 bp proximal
Rr372438	regulatory region 372438	239 bp upstream
Tssr14956	transcription start site region 14956	933 bp upstream
Tssr14957	transcription start site region 14957	221 bp upstream
Tssr14958	transcription start site region 14958	1460 bp downstream