rs8245061 SNP Detail

Summary

• ID
  rs8245061
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170797155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGGTTGCTG ATCCATTCAG
  AGCAGCTCCA GACAGACAAA GAGACGGTGA CAAAGAAGAG AGTGAGGAGA TATAAAAAGA
  AGACTTACCA TGAGTCCCAG CAGCAAGATC TGTAAGAAAG GAAGTAAGCA TCAACCAGGG
  CCTTCTGTAC TGAGACATGC CTACCCAGAC CCAGAGCCCC AACTCACTCC CACAGCCCAC
  M
  CTTCAAGGCC TGGCCCTTCC CTGGGACTTC CTGGATAAAG CACACTTTCA GAGATAATTA
  GGCCCCTTCC CCTTAGCATG TGTGTTGTGA CACTTTAAAG GGCCAAACAC CTTTGACTGC
  TAAGGCCCCG GTTGAAGTTT ACATAGAATT AGTGGTTTAG TACATCAGAC TTTGCCAAGG
  TCCATCCTGG GAGTAGGGTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12740127	Fcgr2b_1_JC4886_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8245061					SNP	C	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170797155 () rs orientation: forward

Symbol	Name	Function Class
D1Dcr16	DNA Segment, Chr 1, Derry C. Roopenian 16	277 bp proximal
D1Mit148	DNA segment, Chr 1, Massachusetts Institute of Technology 148	297 bp proximal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	1155 bp distal
Rr25626	regulatory region 25626	948 bp proximal
Rr372438	regulatory region 372438	590 bp downstream
Tssr14958	transcription start site region 14958	1361 bp upstream