rs8245078 SNP Detail

Summary

• ID
  rs8245078
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170794904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                 A AACGNCAGCN ATAGCAGTTG CTAATAGCCC
  CTGGTAGTTN TTCTAGAAGG GAAACCTACT TTTTGCCAGG AGCCTTGTAA AATCAATGAT
  Y
  TGCTCGGCAA AGNTTTAACA AGCCNTGCCC TGTTTCGGAT ACTNCAAATA TGAANATGGA
  CGAGACACAG CTTTTCACGT CNAGTGCNCA CAAGGTGATG GAAGAAAAAN NAAAANNNAA
  GTCAAGGACC TGCTGGAACT GCAAGGGGGA GAGGTGAGTG NTCCCCANAA CCTNCTGGGG
  AGAGGTCTCC NCACCTTCAG CTGAGCAGAT GAAAATCCTG AGCTCAAGGT TAAATACATC
  AGTCAGCTTT GTATACACNG TTCTTCC                                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	B10.D2-Hc<0> H2 H2-T18/oSnJ	C57BL/6J	CAST/EiJ	MRL/MpJ	SPRET/EiJ
ss12740144	Fcgr2b_1_JC4890_2	ROCHEBIO	RPAMM	f	SNP	C	T	C	C	C	C
ss12741056	Fcgr2b_2_JC4905_4	ROCHEBIO	RPAMM	f	SNP	C	T				C
SNP Consensus Information
SNP					Consensus Type	129/Sv	B10.D2-Hc<0> H2 H2-T18/oSnJ	C57BL/6J	CAST/EiJ	MRL/MpJ	SPRET/EiJ
rs8245078					SNP	C	T	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170794904 () rs orientation: forward

Symbol	Name	Function Class
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	497 bp proximal
Rr372438	regulatory region 372438	within coordinates
Tssr14956	transcription start site region 14956	1524 bp upstream
Tssr14957	transcription start site region 14957	812 bp upstream
Tssr14958	transcription start site region 14958	869 bp downstream